Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Mir674-201ENSMUST00000102421 100 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Mir760-201ENSMUST00000103257 119 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm24473-201ENSMUST00000104483 131 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm13469-201ENSMUST00000118231 350 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm11318-201ENSMUST00000118640 961 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm12189-201ENSMUST00000119779 912 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm21990-201ENSMUST00000124692 383 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm22552-201ENSMUST00000157796 337 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm27299-201ENSMUST00000184593 103 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm28492-201ENSMUST00000190899 1019 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm44111-201ENSMUST00000204649 399 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm44213-201ENSMUST00000204977 703 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm45246-201ENSMUST00000210820 367 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 AC154642.1-201ENSMUST00000224173 740 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 AC154646.1-201ENSMUST00000225011 1092 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm24032-201ENSMUST00000083932 159 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm43577-201ENSMUST00000197090 3344 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm45061-201ENSMUST00000204395 2095 ntBASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Smc1aQ9CU62 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm14324-201ENSMUST00000121358 3051 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm24790-201ENSMUST00000104285 132 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm11462-201ENSMUST00000117749 562 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm12242-201ENSMUST00000118824 738 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm23891-201ENSMUST00000158114 138 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm17217-201ENSMUST00000166613 469 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm20614-201ENSMUST00000177106 632 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm29470-201ENSMUST00000188007 696 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm21301-201ENSMUST00000189476 699 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Robo2-210ENSMUST00000226478 8059 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 AC166574.3-201ENSMUST00000226725 367 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Cma2-202ENSMUST00000228263 857 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Smc1aQ9CU62 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Gm37289-201ENSMUST00000195409 1402 ntBASIC7.22□□□□□ -1.25
Smc1aQ9CU62 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms