Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm14615-201ENSMUST00000117575 1816 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm23739-201ENSMUST00000102295 108 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm23539-201ENSMUST00000157537 224 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm23030-201ENSMUST00000158004 273 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm7952-201ENSMUST00000180540 984 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Mir7008-201ENSMUST00000184398 63 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm28413-201ENSMUST00000189369 291 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm6693-201ENSMUST00000189583 813 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm43160-201ENSMUST00000196453 421 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Olfr809-203ENSMUST00000218237 1100 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Mylf-ps-201ENSMUST00000222174 421 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm33312-201ENSMUST00000222443 332 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm9839-201ENSMUST00000195252 1437 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm42478-201ENSMUST00000199252 1467 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC5.7□□□□□ -1.5
Scrt1Q99M85 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scrt1Q99M85 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 AC114585.1-201ENSMUST00000228080 3680 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Mir760-201ENSMUST00000103257 119 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm15781-201ENSMUST00000120216 323 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm17366-201ENSMUST00000167629 187 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Mir6361-201ENSMUST00000185079 101 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm29357-201ENSMUST00000186877 698 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm28620-201ENSMUST00000190463 439 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm44312-201ENSMUST00000203536 469 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 AC132260.2-201ENSMUST00000224482 344 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.69□□□□□ -1.5
Scrt1Q99M85 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scrt1Q99M85 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms