Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm20615-201ENSMUST00000177503 705 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC6.29□□□□□ -1.4
ClpbQ60649 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm27299-201ENSMUST00000184593 103 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
ClpbQ60649 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm29605-201ENSMUST00000190800 292 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm43048-201ENSMUST00000196101 388 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 Gm45626-201ENSMUST00000210093 361 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm42968-201ENSMUST00000198578 1372 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ClpbQ60649 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ClpbQ60649 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.29□□□□□ -1.4
ClpbQ60649 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
ClpbQ60649 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ClpbQ60649 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.28□□□□□ -1.4
ClpbQ60649 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
ClpbQ60649 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ClpbQ60649 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm12842-201ENSMUST00000117298 476 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Gm16149-201ENSMUST00000117631 309 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Gm5133-201ENSMUST00000118940 1255 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Gm12447-201ENSMUST00000119110 470 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Gm14614-201ENSMUST00000119873 384 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Gm7113-201ENSMUST00000120477 958 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Gm11498-201ENSMUST00000120660 949 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Mir1903-201ENSMUST00000122574 80 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.28□□□□□ -1.4
ClpbQ60649 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm24465-201ENSMUST00000178398 107 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm7804-202ENSMUST00000194187 854 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm43929-201ENSMUST00000203025 409 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC6.28□□□□□ -1.4
ClpbQ60649 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.28□□□□□ -1.4
ClpbQ60649 AC122924.1-201ENSMUST00000222044 163 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 AC117769.2-201ENSMUST00000224612 469 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 AC154562.1-201ENSMUST00000226140 966 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.28□□□□□ -1.4
ClpbQ60649 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ClpbQ60649 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ClpbQ60649 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
ClpbQ60649 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
ClpbQ60649 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
ClpbQ60649 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.28□□□□□ -1.4
ClpbQ60649 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
ClpbQ60649 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
ClpbQ60649 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms