Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PrkdcP97313 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PrkdcP97313 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
PrkdcP97313 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PrkdcP97313 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
PrkdcP97313 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PrkdcP97313 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm13488-201ENSMUST00000120419 179 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm26381-201ENSMUST00000174895 92 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Gm3841-201ENSMUST00000191399 451 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm45739-201ENSMUST00000213094 388 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 n-R5s56-201ENSMUST00000082521 105 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Dpp6-202ENSMUST00000101471 4491 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm30698-201ENSMUST00000214789 3198 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm43398-201ENSMUST00000196584 2742 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Gm14115-201ENSMUST00000119242 482 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm3339-201ENSMUST00000163462 475 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Mir7687-201ENSMUST00000184722 59 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Mir7087-201ENSMUST00000184840 70 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Gm28385-201ENSMUST00000185671 292 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Mir409-201ENSMUST00000198153 79 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Gm5318-201ENSMUST00000205249 406 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm5080-201ENSMUST00000220341 743 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PrkdcP97313 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm26098-201ENSMUST00000157247 288 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Gm7609-204ENSMUST00000161424 461 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Gm9457-201ENSMUST00000180176 372 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.21□□□□□ -1.74
PrkdcP97313 AC159208.1-201ENSMUST00000221403 649 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Gm7557-201ENSMUST00000221935 865 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 CT030182.2-201ENSMUST00000223569 620 ntBASIC4.21□□□□□ -1.74
PrkdcP97313 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
PrkdcP97313 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC4.21□□□□□ -1.74
PrkdcP97313 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PrkdcP97313 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PrkdcP97313 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
PrkdcP97313 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PrkdcP97313 Gm37107-201ENSMUST00000195326 2552 ntBASIC4.2□□□□□ -1.74
PrkdcP97313 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
PrkdcP97313 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PrkdcP97313 Gm6134-201ENSMUST00000117265 171 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms