Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm29383-201ENSMUST00000188284 480 ntBASIC7.11□□□□□ -1.27
Usp4P35123 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Mir669a-6-201ENSMUST00000196127 87 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Gm43147-201ENSMUST00000196944 542 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.11□□□□□ -1.27
Usp4P35123 Mir669a-12-201ENSMUST00000197274 87 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Mir669a-5-201ENSMUST00000197439 87 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Mir669a-10-201ENSMUST00000197745 87 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Mir669a-11-201ENSMUST00000197952 87 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Mir669a-4-201ENSMUST00000198665 87 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Mir669a-9-201ENSMUST00000200087 87 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Mir669a-8-201ENSMUST00000200268 87 ntBASIC7.11□□□□□ -1.27
Usp4P35123 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Usp4P35123 Gm18598-201ENSMUST00000207724 597 ntBASIC7.11□□□□□ -1.27
Usp4P35123 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC7.11□□□□□ -1.27
Usp4P35123 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC7.11□□□□□ -1.27
Usp4P35123 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.11□□□□□ -1.27
Usp4P35123 AV026068-220ENSMUST00000224153 1147 ntBASIC7.11□□□□□ -1.27
Usp4P35123 AV026068-224ENSMUST00000224827 928 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Usp4P35123 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Gm37303-201ENSMUST00000194202 1559 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.11□□□□□ -1.27
Usp4P35123 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 AC139754.2-201ENSMUST00000218037 1455 ntBASIC7.11□□□□□ -1.27
Usp4P35123 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Usp4P35123 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Usp4P35123 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Usp4P35123 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm42942-201ENSMUST00000196086 1328 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 Gm17170-201ENSMUST00000112785 316 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm14727-201ENSMUST00000118526 525 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm8421-201ENSMUST00000119439 305 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm14554-201ENSMUST00000119548 661 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm13486-201ENSMUST00000119910 282 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm12104-201ENSMUST00000120359 979 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm14721-201ENSMUST00000121381 525 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC7.1□□□□□ -1.27
Usp4P35123 Gm23467-201ENSMUST00000157127 159 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC7.1□□□□□ -1.27
Usp4P35123 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Usp4P35123 Gm23633-201ENSMUST00000175293 119 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Mir6908-201ENSMUST00000184056 63 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC7.1□□□□□ -1.27
Usp4P35123 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 Gm37934-201ENSMUST00000192902 402 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.1□□□□□ -1.27
Usp4P35123 Gm43160-201ENSMUST00000196453 421 ntBASIC7.1□□□□□ -1.27
Usp4P35123 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 Gm42581-201ENSMUST00000201774 966 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm44705-201ENSMUST00000206719 339 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm45725-201ENSMUST00000212962 337 ntBASIC7.1□□□□□ -1.27
Usp4P35123 AL929265.1-201ENSMUST00000213427 125 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Usp4P35123 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Usp4P35123 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.1□□□□□ -1.27
Usp4P35123 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Gm31711-201ENSMUST00000220687 196 ntBASIC7.1□□□□□ -1.27
Usp4P35123 Diaph3-206ENSMUST00000226745 713 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms