Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a1P02463 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Col4a1P02463 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Col4a1P02463 AC164107.1-202ENSMUST00000228953 1816 ntBASIC7.65□□□□□ -1.19
Col4a1P02463 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col4a1P02463 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC7.65□□□□□ -1.19
Col4a1P02463 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Col4a1P02463 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col4a1P02463 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col4a1P02463 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Col4a1P02463 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
Col4a1P02463 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.65□□□□□ -1.19
Col4a1P02463 Gm232-201ENSMUST00000216549 2559 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a1P02463 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a1P02463 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a1P02463 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a1P02463 Gm13451-201ENSMUST00000117649 592 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC7.64□□□□□ -1.19
Col4a1P02463 Gm23995-201ENSMUST00000158060 129 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 Gm25439-201ENSMUST00000158280 131 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC7.64□□□□□ -1.19
Col4a1P02463 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 AC122332.1-201ENSMUST00000214384 285 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC7.64□□□□□ -1.19
Col4a1P02463 AC154556.1-201ENSMUST00000224587 885 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Col4a1P02463 Gm28392-201ENSMUST00000077630 393 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 n-R5s180-201ENSMUST00000082770 106 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.64□□□□□ -1.19
Col4a1P02463 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a1P02463 Gm42544-201ENSMUST00000197868 3242 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 AC122769.3-201ENSMUST00000227739 3245 ntBASIC7.64□□□□□ -1.19
Col4a1P02463 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a1P02463 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a1P02463 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC7.64□□□□□ -1.19
Col4a1P02463 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC7.64□□□□□ -1.19
Col4a1P02463 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a1P02463 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a1P02463 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.64□□□□□ -1.19
Col4a1P02463 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
Col4a1P02463 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a1P02463 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Col4a1P02463 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC7.64□□□□□ -1.19
Col4a1P02463 Gm23485-201ENSMUST00000104181 155 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC7.63□□□□□ -1.19
Col4a1P02463 Gm19231-201ENSMUST00000193212 830 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Mir219c-201ENSMUST00000199860 60 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC7.63□□□□□ -1.19
Col4a1P02463 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col4a1P02463 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 AC153800.1-201ENSMUST00000219212 365 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 AC165260.6-204ENSMUST00000225571 3508 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col4a1P02463 Gm24525-201ENSMUST00000082917 151 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Col4a1P02463 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col4a1P02463 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 AC107453.1-201ENSMUST00000227490 3268 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Col4a1P02463 Gm11972-201ENSMUST00000118514 389 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC7.63□□□□□ -1.19
Col4a1P02463 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Gm6477-201ENSMUST00000217098 764 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 AC161884.2-201ENSMUST00000224513 227 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Mir7-2-201ENSMUST00000083675 97 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col4a1P02463 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Col4a1P02463 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Col4a1P02463 Gm43581-201ENSMUST00000196766 2864 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 Pan2-206ENSMUST00000219721 4316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Col4a1P02463 Gm7205-201ENSMUST00000196032 1323 ntBASIC7.63□□□□□ -1.19
Col4a1P02463 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col4a1P02463 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col4a1P02463 Gm19125-201ENSMUST00000188408 1383 ntBASIC7.62□□□□□ -1.19
Col4a1P02463 Gm44068-201ENSMUST00000204049 2128 ntBASIC7.62□□□□□ -1.19
Col4a1P02463 Gm43425-201ENSMUST00000201793 3291 ntBASIC7.62□□□□□ -1.19
Col4a1P02463 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Col4a1P02463 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Col4a1P02463 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Col4a1P02463 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.62□□□□□ -1.19
Col4a1P02463 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms