Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm28953-201ENSMUST00000188336 697 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm20788-201ENSMUST00000190538 697 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm37392-201ENSMUST00000192098 516 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm18635-201ENSMUST00000199020 1060 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm45478-201ENSMUST00000209472 211 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm18597-201ENSMUST00000209519 694 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 AC154198.1-201ENSMUST00000222839 424 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 AC154747.4-202ENSMUST00000223826 852 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm6863-201ENSMUST00000052882 636 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm22043-201ENSMUST00000082993 158 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdh1F7BJK1 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm44769-201ENSMUST00000206120 2809 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm25273-201ENSMUST00000104295 115 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm22671-201ENSMUST00000104420 134 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm12636-201ENSMUST00000117395 624 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm11406-201ENSMUST00000117418 484 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm5319-201ENSMUST00000118965 873 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm15665-201ENSMUST00000119116 847 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm21909-201ENSMUST00000178260 439 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm26991-201ENSMUST00000180950 620 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm38181-201ENSMUST00000181357 720 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm19200-201ENSMUST00000182579 1001 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm28142-201ENSMUST00000186899 698 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm36928-201ENSMUST00000192466 694 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm37325-201ENSMUST00000194971 694 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm43515-201ENSMUST00000197930 2141 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm43929-201ENSMUST00000203025 409 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 AC160635.1-201ENSMUST00000216731 474 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm8290-201ENSMUST00000218202 477 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm8137-201ENSMUST00000218997 463 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm9973-202ENSMUST00000220926 166 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Gm36758-201ENSMUST00000222594 310 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 AC139845.2-201ENSMUST00000227504 436 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 AC131586.4-201ENSMUST00000228424 668 ntBASIC6.36□□□□□ -1.39
Pcdh1F7BJK1 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms