Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Gm29438-201ENSMUST00000191298 2613 ntBASIC7.77□□□□□ -1.17
Clp1Q99LI9 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Clp1Q99LI9 Gm43766-201ENSMUST00000200590 5417 ntBASIC7.77□□□□□ -1.17
Clp1Q99LI9 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Klf5-202ENSMUST00000226784 2852 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 AC153955.4-201ENSMUST00000217069 2752 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm14891-201ENSMUST00000117378 596 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm12520-201ENSMUST00000117493 316 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm5752-201ENSMUST00000117771 594 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm22794-201ENSMUST00000157228 306 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm22555-201ENSMUST00000157801 62 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm17212-201ENSMUST00000166666 259 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm10136-201ENSMUST00000183196 435 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm8669-201ENSMUST00000183839 945 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm36965-201ENSMUST00000193797 394 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm17952-201ENSMUST00000193914 747 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm2860-201ENSMUST00000199226 707 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Ighv1-83-201ENSMUST00000199643 351 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm17997-201ENSMUST00000211801 840 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm19181-201ENSMUST00000218891 940 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 CT009556.4-201ENSMUST00000227092 200 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 AC139845.2-201ENSMUST00000227504 436 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm25403-201ENSMUST00000082971 143 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm37132-201ENSMUST00000195553 2238 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm44750-201ENSMUST00000206185 2223 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm29113-201ENSMUST00000185991 3432 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm45477-201ENSMUST00000200213 5498 ntBASIC7.76□□□□□ -1.17
Clp1Q99LI9 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Clp1Q99LI9 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Clp1Q99LI9 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Clp1Q99LI9 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Clp1Q99LI9 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Clp1Q99LI9 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC7.75□□□□□ -1.17
Clp1Q99LI9 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Clp1Q99LI9 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Clp1Q99LI9 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.75□□□□□ -1.17
Clp1Q99LI9 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Clp1Q99LI9 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Clp1Q99LI9 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Clp1Q99LI9 Pramel-201ENSMUST00000118979 1383 ntBASIC7.75□□□□□ -1.17
Clp1Q99LI9 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Clp1Q99LI9 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Clp1Q99LI9 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms