Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Col16a1Q8BLX7 Gm42866-201ENSMUST00000195919 3304 ntBASIC8.33□□□□□ -1.08
Col16a1Q8BLX7 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 AC158537.1-201ENSMUST00000224637 1711 ntBASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm12650-201ENSMUST00000121966 258 ntBASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Mir3095-201ENSMUST00000175552 87 ntBASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm27409-201ENSMUST00000184727 80 ntBASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm9480-201ENSMUST00000198038 616 ntBASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm33242-201ENSMUST00000212130 1057 ntBASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 n-R5s204-201ENSMUST00000082972 119 ntBASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Col16a1Q8BLX7 Gm14158-201ENSMUST00000118409 308 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm3943-201ENSMUST00000118606 718 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm8323-201ENSMUST00000168436 1201 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm2877-201ENSMUST00000178248 1204 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm8324-201ENSMUST00000178911 1204 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm2871-201ENSMUST00000179984 1204 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Mir6903-201ENSMUST00000183597 88 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm44382-201ENSMUST00000198683 122 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Mir219c-201ENSMUST00000199860 60 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm7676-201ENSMUST00000084055 319 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm24230-201ENSMUST00000104313 129 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm43222-201ENSMUST00000199013 603 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm17988-201ENSMUST00000208796 535 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 Gm6477-201ENSMUST00000217098 764 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 AC166358.3-201ENSMUST00000221456 181 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 AC125543.4-201ENSMUST00000223385 117 ntBASIC8.31□□□□□ -1.08
Col16a1Q8BLX7 AC165260.1-201ENSMUST00000224127 683 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms