Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm44186-201ENSMUST00000204118 2752 ntBASIC5.64□□□□□ -1.51
Nkx3-1P97436 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx3-1P97436 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm5084-202ENSMUST00000224064 3609 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 AC122346.1-201ENSMUST00000225266 3732 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm4911-201ENSMUST00000119388 945 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm22820-201ENSMUST00000157205 329 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm8241-201ENSMUST00000189286 816 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm3351-201ENSMUST00000193454 505 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm43354-201ENSMUST00000196862 346 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 AC168062.1-201ENSMUST00000228048 769 ntBASIC5.63□□□□□ -1.51
Nkx3-1P97436 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx3-1P97436 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm38381-201ENSMUST00000193594 2275 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 AC139350.2-201ENSMUST00000226508 2331 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm8534-201ENSMUST00000118553 766 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm13455-201ENSMUST00000118767 517 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm15621-201ENSMUST00000119162 364 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm15158-201ENSMUST00000120577 570 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm23343-201ENSMUST00000158964 143 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm3841-201ENSMUST00000191399 451 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm38097-201ENSMUST00000192936 439 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm44075-201ENSMUST00000204208 216 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm17918-201ENSMUST00000205315 574 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Mylf-ps-201ENSMUST00000222174 421 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.62□□□□□ -1.51
Nkx3-1P97436 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
Nkx3-1P97436 Gm14935-201ENSMUST00000121528 1708 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms