Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Thoc7-209ENSMUST00000225325 765 ntBASIC6.53□□□□□ -1.36
HttP42859 Mir17-201ENSMUST00000083574 84 ntBASIC6.53□□□□□ -1.36
HttP42859 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.53□□□□□ -1.36
HttP42859 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HttP42859 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HttP42859 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HttP42859 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
HttP42859 Mir1193-201ENSMUST00000116761 121 ntBASIC6.52□□□□□ -1.37
HttP42859 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.52□□□□□ -1.37
HttP42859 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HttP42859 Gm28507-201ENSMUST00000189737 703 ntBASIC6.52□□□□□ -1.37
HttP42859 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.52□□□□□ -1.37
HttP42859 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.52□□□□□ -1.37
HttP42859 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.52□□□□□ -1.37
HttP42859 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Gm23514-201ENSMUST00000082827 130 ntBASIC6.52□□□□□ -1.37
HttP42859 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HttP42859 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.52□□□□□ -1.37
HttP42859 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.52□□□□□ -1.37
HttP42859 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HttP42859 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.52□□□□□ -1.37
HttP42859 Gm15971-201ENSMUST00000119372 211 ntBASIC6.52□□□□□ -1.37
HttP42859 Gm23459-201ENSMUST00000083259 131 ntBASIC6.52□□□□□ -1.37
HttP42859 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HttP42859 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HttP42859 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC6.52□□□□□ -1.37
HttP42859 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.52□□□□□ -1.37
HttP42859 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.52□□□□□ -1.37
HttP42859 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HttP42859 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.52□□□□□ -1.37
HttP42859 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC6.52□□□□□ -1.37
HttP42859 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.52□□□□□ -1.37
HttP42859 AC116724.1-201ENSMUST00000227900 972 ntBASIC6.52□□□□□ -1.37
HttP42859 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.52□□□□□ -1.37
HttP42859 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.51□□□□□ -1.37
HttP42859 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.51□□□□□ -1.37
HttP42859 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
HttP42859 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.51□□□□□ -1.37
HttP42859 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.51□□□□□ -1.37
HttP42859 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.51□□□□□ -1.37
HttP42859 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Gm29357-201ENSMUST00000186877 698 ntBASIC6.51□□□□□ -1.37
HttP42859 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.51□□□□□ -1.37
HttP42859 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6.51□□□□□ -1.37
HttP42859 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC6.51□□□□□ -1.37
HttP42859 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.51□□□□□ -1.37
HttP42859 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HttP42859 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
HttP42859 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HttP42859 Gm14762-201ENSMUST00000105109 1771 ntBASIC6.51□□□□□ -1.37
HttP42859 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HttP42859 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.51□□□□□ -1.37
HttP42859 Gm14900-201ENSMUST00000120304 733 ntBASIC6.51□□□□□ -1.37
HttP42859 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.51□□□□□ -1.37
HttP42859 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HttP42859 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HttP42859 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC6.51□□□□□ -1.37
HttP42859 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HttP42859 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HttP42859 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HttP42859 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HttP42859 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HttP42859 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HttP42859 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC6.5□□□□□ -1.37
HttP42859 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.5□□□□□ -1.37
HttP42859 Gm13604-201ENSMUST00000119332 482 ntBASIC6.5□□□□□ -1.37
HttP42859 Gm15171-201ENSMUST00000122191 334 ntBASIC6.5□□□□□ -1.37
HttP42859 Gm22789-201ENSMUST00000157884 130 ntBASIC6.5□□□□□ -1.37
HttP42859 Gm7609-204ENSMUST00000161424 461 ntBASIC6.5□□□□□ -1.37
HttP42859 Gm9671-201ENSMUST00000171502 547 ntBASIC6.5□□□□□ -1.37
HttP42859 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HttP42859 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HttP42859 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HttP42859 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms