Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
Col1a1P11087 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Col1a1P11087 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.48□□□□□ -1.21
Col1a1P11087 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Col1a1P11087 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Col1a1P11087 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Col1a1P11087 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.48□□□□□ -1.21
Col1a1P11087 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Col1a1P11087 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
Col1a1P11087 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Col1a1P11087 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.48□□□□□ -1.21
Col1a1P11087 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Col1a1P11087 Gm25345-201ENSMUST00000104505 133 ntBASIC7.48□□□□□ -1.21
Col1a1P11087 Gm14335-201ENSMUST00000119165 810 ntBASIC7.48□□□□□ -1.21
Col1a1P11087 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC7.48□□□□□ -1.21
Col1a1P11087 Gm22342-201ENSMUST00000122647 298 ntBASIC7.48□□□□□ -1.21
Col1a1P11087 Gm25906-201ENSMUST00000158489 126 ntBASIC7.48□□□□□ -1.21
Col1a1P11087 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC7.48□□□□□ -1.21
Col1a1P11087 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC7.48□□□□□ -1.21
Col1a1P11087 AC165092.4-201ENSMUST00000225025 679 ntBASIC7.48□□□□□ -1.21
Col1a1P11087 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Col1a1P11087 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
Col1a1P11087 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col1a1P11087 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Col1a1P11087 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Col1a1P11087 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.47□□□□□ -1.21
Col1a1P11087 Gm43766-201ENSMUST00000200590 5417 ntBASIC7.47□□□□□ -1.21
Col1a1P11087 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Col1a1P11087 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Col1a1P11087 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Gm37092-201ENSMUST00000193381 1518 ntBASIC7.47□□□□□ -1.21
Col1a1P11087 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Col1a1P11087 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Col1a1P11087 Gm11885-201ENSMUST00000118473 1428 ntBASIC7.47□□□□□ -1.21
Col1a1P11087 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC7.47□□□□□ -1.21
Col1a1P11087 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC7.47□□□□□ -1.21
Col1a1P11087 Gm6541-201ENSMUST00000165542 561 ntBASIC7.47□□□□□ -1.21
Col1a1P11087 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Col1a1P11087 Gm3605-201ENSMUST00000185858 440 ntBASIC7.47□□□□□ -1.21
Col1a1P11087 Gm29160-201ENSMUST00000190094 699 ntBASIC7.47□□□□□ -1.21
Col1a1P11087 Gm37235-201ENSMUST00000195171 59 ntBASIC7.47□□□□□ -1.21
Col1a1P11087 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.47□□□□□ -1.21
Col1a1P11087 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 AC122371.2-201ENSMUST00000220583 366 ntBASIC7.47□□□□□ -1.21
Col1a1P11087 AC163743.1-201ENSMUST00000224309 270 ntBASIC7.47□□□□□ -1.21
Col1a1P11087 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC7.47□□□□□ -1.21
Col1a1P11087 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Col1a1P11087 Mir375-201ENSMUST00000083682 64 ntBASIC7.47□□□□□ -1.21
Col1a1P11087 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.47□□□□□ -1.21
Col1a1P11087 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Col1a1P11087 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Col1a1P11087 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Col1a1P11087 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Col1a1P11087 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC7.46□□□□□ -1.21
Col1a1P11087 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.46□□□□□ -1.21
Col1a1P11087 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Col1a1P11087 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Col1a1P11087 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC7.46□□□□□ -1.21
Col1a1P11087 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm12396-201ENSMUST00000121600 306 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm25057-201ENSMUST00000157366 88 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm23757-201ENSMUST00000158353 100 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm6808-201ENSMUST00000162341 807 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Col1a1P11087 Gm27409-201ENSMUST00000184727 80 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm8506-201ENSMUST00000186661 829 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm8581-201ENSMUST00000188636 890 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm37758-201ENSMUST00000194275 629 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC7.46□□□□□ -1.22
Col1a1P11087 Gm18943-201ENSMUST00000207357 1216 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm17988-201ENSMUST00000208796 535 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC7.46□□□□□ -1.22
Col1a1P11087 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC7.46□□□□□ -1.22
Col1a1P11087 Gm9237-201ENSMUST00000221499 548 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.46□□□□□ -1.22
Col1a1P11087 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms