Protein–RNA interactions for Protein: T1NXB5

Vstm4, V-set and transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vstm4T1NXB5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vstm4T1NXB5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.66■□□□□ 0.74
Vstm4T1NXB5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vstm4T1NXB5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Vstm4T1NXB5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vstm4T1NXB5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vstm4T1NXB5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vstm4T1NXB5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vstm4T1NXB5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vstm4T1NXB5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vstm4T1NXB5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vstm4T1NXB5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vstm4T1NXB5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vstm4T1NXB5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
Vstm4T1NXB5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Vstm4T1NXB5 Gm12821-201ENSMUST00000120022 600 ntBASIC19.64■□□□□ 0.73
Vstm4T1NXB5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Vstm4T1NXB5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vstm4T1NXB5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vstm4T1NXB5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vstm4T1NXB5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vstm4T1NXB5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Vstm4T1NXB5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Gm13146-201ENSMUST00000118508 780 ntBASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Vstm4T1NXB5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Gm43017-201ENSMUST00000198296 752 ntBASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vstm4T1NXB5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms