Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ClcnkaQ9WUB7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Gm7290-201ENSMUST00000104990 617 ntBASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Gm12918-201ENSMUST00000120234 636 ntBASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Gm15710-201ENSMUST00000121821 636 ntBASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Gm5075-201ENSMUST00000196916 622 ntBASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.66■□□□□ 0.26
ClcnkaQ9WUB7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ClcnkaQ9WUB7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ClcnkaQ9WUB7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
ClcnkaQ9WUB7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ClcnkaQ9WUB7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ClcnkaQ9WUB7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ClcnkaQ9WUB7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClcnkaQ9WUB7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ClcnkaQ9WUB7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClcnkaQ9WUB7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ClcnkaQ9WUB7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ClcnkaQ9WUB7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClcnkaQ9WUB7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ClcnkaQ9WUB7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClcnkaQ9WUB7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ClcnkaQ9WUB7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ClcnkaQ9WUB7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ClcnkaQ9WUB7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms