Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Spcs1-204ENSMUST00000226782 949 ntBASIC14.05□□□□□ -0.16
CcsQ9WU84 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcsQ9WU84 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcsQ9WU84 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcsQ9WU84 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.05□□□□□ -0.16
CcsQ9WU84 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcsQ9WU84 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcsQ9WU84 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcsQ9WU84 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcsQ9WU84 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CcsQ9WU84 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcsQ9WU84 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CcsQ9WU84 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcsQ9WU84 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CcsQ9WU84 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcsQ9WU84 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CcsQ9WU84 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcsQ9WU84 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcsQ9WU84 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.04□□□□□ -0.16
CcsQ9WU84 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CcsQ9WU84 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcsQ9WU84 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcsQ9WU84 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcsQ9WU84 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcsQ9WU84 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CcsQ9WU84 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Gm12251-201ENSMUST00000117893 792 ntBASIC14.03□□□□□ -0.16
CcsQ9WU84 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.03□□□□□ -0.16
CcsQ9WU84 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CcsQ9WU84 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.03□□□□□ -0.16
CcsQ9WU84 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CcsQ9WU84 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CcsQ9WU84 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcsQ9WU84 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcsQ9WU84 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.02□□□□□ -0.16
CcsQ9WU84 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CcsQ9WU84 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcsQ9WU84 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcsQ9WU84 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcsQ9WU84 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CcsQ9WU84 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcsQ9WU84 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.02□□□□□ -0.16
CcsQ9WU84 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CcsQ9WU84 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CcsQ9WU84 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcsQ9WU84 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcsQ9WU84 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.02□□□□□ -0.16
CcsQ9WU84 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CcsQ9WU84 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.02□□□□□ -0.16
CcsQ9WU84 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcsQ9WU84 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcsQ9WU84 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcsQ9WU84 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcsQ9WU84 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.02□□□□□ -0.17
CcsQ9WU84 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CcsQ9WU84 Mir6236-201ENSMUST00000184437 123 ntBASIC14.02□□□□□ -0.17
CcsQ9WU84 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.02□□□□□ -0.17
CcsQ9WU84 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcsQ9WU84 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.02□□□□□ -0.17
CcsQ9WU84 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcsQ9WU84 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcsQ9WU84 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CcsQ9WU84 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
CcsQ9WU84 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CcsQ9WU84 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CcsQ9WU84 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CcsQ9WU84 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CcsQ9WU84 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcsQ9WU84 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CcsQ9WU84 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcsQ9WU84 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CcsQ9WU84 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcsQ9WU84 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CcsQ9WU84 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcsQ9WU84 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcsQ9WU84 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcsQ9WU84 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CcsQ9WU84 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
CcsQ9WU84 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CcsQ9WU84 Gm43017-201ENSMUST00000198296 752 ntBASIC14.01□□□□□ -0.17
CcsQ9WU84 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms