Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx6Q9R1R0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Lhx6Q9R1R0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx6Q9R1R0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lhx6Q9R1R0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Lhx6Q9R1R0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lhx6Q9R1R0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Golph3-205ENSMUST00000228671 2842 ntBASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 AA414768-201ENSMUST00000121924 1257 ntBASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx6Q9R1R0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Gm10013-201ENSMUST00000106074 672 ntBASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Gm6345-202ENSMUST00000180900 204 ntBASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx6Q9R1R0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Gm13559-201ENSMUST00000120476 863 ntBASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Gm7889-201ENSMUST00000185591 958 ntBASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lhx6Q9R1R0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Gm17971-201ENSMUST00000190239 806 ntBASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx6Q9R1R0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms