Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdh17Q9R100 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.66■□□□□ 0.42
Cdh17Q9R100 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Cdh17Q9R100 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Gm10033-202ENSMUST00000211874 928 ntBASIC17.66■□□□□ 0.42
Cdh17Q9R100 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Cdh17Q9R100 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.65■□□□□ 0.42
Cdh17Q9R100 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdh17Q9R100 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.65■□□□□ 0.42
Cdh17Q9R100 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cdh17Q9R100 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Cdh17Q9R100 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdh17Q9R100 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cdh17Q9R100 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh17Q9R100 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh17Q9R100 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh17Q9R100 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh17Q9R100 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh17Q9R100 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh17Q9R100 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh17Q9R100 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.64■□□□□ 0.41
Cdh17Q9R100 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh17Q9R100 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh17Q9R100 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cdh17Q9R100 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cdh17Q9R100 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.63■□□□□ 0.41
Cdh17Q9R100 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh17Q9R100 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdh17Q9R100 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cdh17Q9R100 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh17Q9R100 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh17Q9R100 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Cdh17Q9R100 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh17Q9R100 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh17Q9R100 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.63■□□□□ 0.41
Cdh17Q9R100 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdh17Q9R100 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cdh17Q9R100 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Cdh17Q9R100 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh17Q9R100 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh17Q9R100 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh17Q9R100 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh17Q9R100 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh17Q9R100 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh17Q9R100 Gm7514-201ENSMUST00000209475 934 ntBASIC17.62■□□□□ 0.41
Cdh17Q9R100 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh17Q9R100 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh17Q9R100 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh17Q9R100 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdh17Q9R100 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh17Q9R100 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh17Q9R100 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh17Q9R100 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh17Q9R100 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh17Q9R100 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh17Q9R100 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cdh17Q9R100 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh17Q9R100 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh17Q9R100 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh17Q9R100 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh17Q9R100 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh17Q9R100 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh17Q9R100 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh17Q9R100 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.6■□□□□ 0.41
Cdh17Q9R100 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Cdh17Q9R100 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh17Q9R100 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.6■□□□□ 0.41
Cdh17Q9R100 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Cdh17Q9R100 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cdh17Q9R100 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh17Q9R100 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.6■□□□□ 0.41
Cdh17Q9R100 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms