Protein–RNA interactions for Protein: Q9JJY3

Smpd3, Sphingomyelin phosphodiesterase 3, mousemouse

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd3Q9JJY3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smpd3Q9JJY3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smpd3Q9JJY3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smpd3Q9JJY3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.53■□□□□ 0.4
Smpd3Q9JJY3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smpd3Q9JJY3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smpd3Q9JJY3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smpd3Q9JJY3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smpd3Q9JJY3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.52■□□□□ 0.4
Smpd3Q9JJY3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.52■□□□□ 0.4
Smpd3Q9JJY3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.52■□□□□ 0.4
Smpd3Q9JJY3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smpd3Q9JJY3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Smpd3Q9JJY3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Smpd3Q9JJY3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smpd3Q9JJY3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.52■□□□□ 0.4
Smpd3Q9JJY3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.52■□□□□ 0.39
Smpd3Q9JJY3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Gm27801-201ENSMUST00000184174 223 ntBASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smpd3Q9JJY3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smpd3Q9JJY3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.49■□□□□ 0.39
Smpd3Q9JJY3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 Gm42642-201ENSMUST00000200683 355 ntBASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smpd3Q9JJY3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms