Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn5aQ9JJV9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn5aQ9JJV9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn5aQ9JJV9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn5aQ9JJV9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Scn5aQ9JJV9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn5aQ9JJV9 Gm38027-201ENSMUST00000192315 235 ntBASIC18.8■□□□□ 0.6
Scn5aQ9JJV9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn5aQ9JJV9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scn5aQ9JJV9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Scn5aQ9JJV9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.8■□□□□ 0.6
Scn5aQ9JJV9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Scn5aQ9JJV9 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.8■□□□□ 0.6
Scn5aQ9JJV9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Gm10517-202ENSMUST00000192970 758 ntBASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn5aQ9JJV9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Gm45058-201ENSMUST00000205810 766 ntBASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn5aQ9JJV9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn5aQ9JJV9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Scn5aQ9JJV9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn5aQ9JJV9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn5aQ9JJV9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn5aQ9JJV9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scn5aQ9JJV9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Scn5aQ9JJV9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scn5aQ9JJV9 Gm27741-201ENSMUST00000185060 237 ntBASIC18.77■□□□□ 0.6
Scn5aQ9JJV9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn5aQ9JJV9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Scn5aQ9JJV9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Scn5aQ9JJV9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Scn5aQ9JJV9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn5aQ9JJV9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 AA414768-201ENSMUST00000121924 1257 ntBASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn5aQ9JJV9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn5aQ9JJV9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn5aQ9JJV9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn5aQ9JJV9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Scn5aQ9JJV9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Scn5aQ9JJV9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn5aQ9JJV9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn5aQ9JJV9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Gm27463-201ENSMUST00000183569 57 ntBASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn5aQ9JJV9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms