Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.98■□□□□ 0.63
Tlr9Q9EQU3 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.98■□□□□ 0.63
Tlr9Q9EQU3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.98■□□□□ 0.63
Tlr9Q9EQU3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr9Q9EQU3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr9Q9EQU3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tlr9Q9EQU3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr9Q9EQU3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr9Q9EQU3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr9Q9EQU3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr9Q9EQU3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tlr9Q9EQU3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tlr9Q9EQU3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Gm22325-201ENSMUST00000158904 308 ntBASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tlr9Q9EQU3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tlr9Q9EQU3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tlr9Q9EQU3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Gm12441-201ENSMUST00000121806 588 ntBASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Gm4968-201ENSMUST00000071458 858 ntBASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tlr9Q9EQU3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms