Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-4Q9EQM3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-4Q9EQM3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.66■□□□□ 0.58
Nkx2-4Q9EQM3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nkx2-4Q9EQM3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.66■□□□□ 0.58
Nkx2-4Q9EQM3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nkx2-4Q9EQM3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-4Q9EQM3 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Gm44771-201ENSMUST00000206975 626 ntBASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-4Q9EQM3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-4Q9EQM3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-4Q9EQM3 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.64■□□□□ 0.57
Nkx2-4Q9EQM3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-4Q9EQM3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Nkx2-4Q9EQM3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-4Q9EQM3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-4Q9EQM3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nkx2-4Q9EQM3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nkx2-4Q9EQM3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-4Q9EQM3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-4Q9EQM3 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.63■□□□□ 0.57
Nkx2-4Q9EQM3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-4Q9EQM3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nkx2-4Q9EQM3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nkx2-4Q9EQM3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nkx2-4Q9EQM3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Nkx2-4Q9EQM3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-4Q9EQM3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-4Q9EQM3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-4Q9EQM3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Nkx2-4Q9EQM3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-4Q9EQM3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.62■□□□□ 0.57
Nkx2-4Q9EQM3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nkx2-4Q9EQM3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-4Q9EQM3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.62■□□□□ 0.57
Nkx2-4Q9EQM3 Gm17807-201ENSMUST00000186869 298 ntBASIC18.62■□□□□ 0.57
Nkx2-4Q9EQM3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-4Q9EQM3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-4Q9EQM3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-4Q9EQM3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-4Q9EQM3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx2-4Q9EQM3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Gm7153-201ENSMUST00000117092 455 ntBASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Mir2861-201ENSMUST00000175539 82 ntBASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx2-4Q9EQM3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 Gm16061-201ENSMUST00000122167 857 ntBASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nkx2-4Q9EQM3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx2-4Q9EQM3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nkx2-4Q9EQM3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Nkx2-4Q9EQM3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms