Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Chmp2aQ9DB34 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Gm4968-201ENSMUST00000071458 858 ntBASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2aQ9DB34 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Chmp2aQ9DB34 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp2aQ9DB34 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp2aQ9DB34 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Chmp2aQ9DB34 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2aQ9DB34 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2aQ9DB34 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2aQ9DB34 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
Chmp2aQ9DB34 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2aQ9DB34 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.89■□□□□ 0.61
Chmp2aQ9DB34 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2aQ9DB34 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2aQ9DB34 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2aQ9DB34 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Chmp2aQ9DB34 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Gm12441-201ENSMUST00000121806 588 ntBASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Chmp2aQ9DB34 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Chmp2aQ9DB34 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chmp2aQ9DB34 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chmp2aQ9DB34 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms