Protein–RNA interactions for Protein: Q9D7I0

Shisa5, Protein shisa-5, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa5Q9D7I0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 Gm10252-201ENSMUST00000209541 832 ntBASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 Rab3c-203ENSMUST00000224180 967 ntBASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa5Q9D7I0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa5Q9D7I0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Gm12527-201ENSMUST00000117967 564 ntBASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Shisa5Q9D7I0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa5Q9D7I0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa5Q9D7I0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa5Q9D7I0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Shisa5Q9D7I0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.4■□□□□ 0.22
Shisa5Q9D7I0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa5Q9D7I0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Shisa5Q9D7I0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.4■□□□□ 0.22
Shisa5Q9D7I0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa5Q9D7I0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa5Q9D7I0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Shisa5Q9D7I0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Gm7977-201ENSMUST00000193787 748 ntBASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Shisa5Q9D7I0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Shisa5Q9D7I0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms