Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lysmd1Q9D0E3 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.52■□□□□ 0.72
Lysmd1Q9D0E3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lysmd1Q9D0E3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lysmd1Q9D0E3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Lysmd1Q9D0E3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lysmd1Q9D0E3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lysmd1Q9D0E3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Lysmd1Q9D0E3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Lysmd1Q9D0E3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd1Q9D0E3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Lysmd1Q9D0E3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Lysmd1Q9D0E3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd1Q9D0E3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Lysmd1Q9D0E3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Lysmd1Q9D0E3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd1Q9D0E3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lysmd1Q9D0E3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Lysmd1Q9D0E3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd1Q9D0E3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd1Q9D0E3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd1Q9D0E3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.5■□□□□ 0.71
Lysmd1Q9D0E3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.5■□□□□ 0.71
Lysmd1Q9D0E3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.5■□□□□ 0.71
Lysmd1Q9D0E3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.5■□□□□ 0.71
Lysmd1Q9D0E3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd1Q9D0E3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lysmd1Q9D0E3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.49■□□□□ 0.71
Lysmd1Q9D0E3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.49■□□□□ 0.71
Lysmd1Q9D0E3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd1Q9D0E3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Lysmd1Q9D0E3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd1Q9D0E3 Gm7638-201ENSMUST00000121348 967 ntBASIC19.49■□□□□ 0.71
Lysmd1Q9D0E3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd1Q9D0E3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Lysmd1Q9D0E3 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.49■□□□□ 0.71
Lysmd1Q9D0E3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd1Q9D0E3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Lysmd1Q9D0E3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Lysmd1Q9D0E3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lysmd1Q9D0E3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Gm26039-201ENSMUST00000158152 144 ntBASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Gm2756-201ENSMUST00000195851 400 ntBASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lysmd1Q9D0E3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Gm8097-201ENSMUST00000117903 829 ntBASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lysmd1Q9D0E3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.45■□□□□ 0.7
Lysmd1Q9D0E3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms