Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx47Q9CWX9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx47Q9CWX9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx47Q9CWX9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.64■□□□□ 0.57
Ddx47Q9CWX9 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.64■□□□□ 0.57
Ddx47Q9CWX9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx47Q9CWX9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.64■□□□□ 0.57
Ddx47Q9CWX9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx47Q9CWX9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx47Q9CWX9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx47Q9CWX9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ddx47Q9CWX9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx47Q9CWX9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx47Q9CWX9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx47Q9CWX9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx47Q9CWX9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx47Q9CWX9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx47Q9CWX9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.61■□□□□ 0.57
Ddx47Q9CWX9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx47Q9CWX9 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.61■□□□□ 0.57
Ddx47Q9CWX9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx47Q9CWX9 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.61■□□□□ 0.57
Ddx47Q9CWX9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx47Q9CWX9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx47Q9CWX9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx47Q9CWX9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx47Q9CWX9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx47Q9CWX9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ddx47Q9CWX9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ddx47Q9CWX9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx47Q9CWX9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx47Q9CWX9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Ddx47Q9CWX9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx47Q9CWX9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx47Q9CWX9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx47Q9CWX9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx47Q9CWX9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx47Q9CWX9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.6■□□□□ 0.57
Ddx47Q9CWX9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ddx47Q9CWX9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Ddx47Q9CWX9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx47Q9CWX9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
Ddx47Q9CWX9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Ddx47Q9CWX9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx47Q9CWX9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ddx47Q9CWX9 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.59■□□□□ 0.57
Ddx47Q9CWX9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms