Protein–RNA interactions for Protein: Q9CR92

Ccdc96, Coiled-coil domain-containing protein 96, mousemouse

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc96Q9CR92 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.64■□□□□ 0.9
Ccdc96Q9CR92 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc96Q9CR92 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc96Q9CR92 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Ccdc96Q9CR92 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc96Q9CR92 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc96Q9CR92 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc96Q9CR92 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc96Q9CR92 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc96Q9CR92 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc96Q9CR92 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc96Q9CR92 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc96Q9CR92 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc96Q9CR92 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc96Q9CR92 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc96Q9CR92 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc96Q9CR92 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc96Q9CR92 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.63■□□□□ 0.89
Ccdc96Q9CR92 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccdc96Q9CR92 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc96Q9CR92 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc96Q9CR92 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Gm13168-201ENSMUST00000121771 632 ntBASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc96Q9CR92 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Rab3c-203ENSMUST00000224180 967 ntBASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc96Q9CR92 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc96Q9CR92 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc96Q9CR92 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc96Q9CR92 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms