Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.08■□□□□ 0.33
Ska1Q9CPV1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ska1Q9CPV1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.08■□□□□ 0.33
Ska1Q9CPV1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ska1Q9CPV1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ska1Q9CPV1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ska1Q9CPV1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ska1Q9CPV1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ska1Q9CPV1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ska1Q9CPV1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ska1Q9CPV1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ska1Q9CPV1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ska1Q9CPV1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Ska1Q9CPV1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ska1Q9CPV1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ska1Q9CPV1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ska1Q9CPV1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ska1Q9CPV1 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.08■□□□□ 0.32
Ska1Q9CPV1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ska1Q9CPV1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ska1Q9CPV1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.06■□□□□ 0.32
Ska1Q9CPV1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ska1Q9CPV1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.04■□□□□ 0.32
Ska1Q9CPV1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ska1Q9CPV1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ska1Q9CPV1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ska1Q9CPV1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ska1Q9CPV1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.03■□□□□ 0.32
Ska1Q9CPV1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms