Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim16Q99PP9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim16Q99PP9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim16Q99PP9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim16Q99PP9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim16Q99PP9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim16Q99PP9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim16Q99PP9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim16Q99PP9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim16Q99PP9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim16Q99PP9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim16Q99PP9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.69■□□□□ 0.42
Trim16Q99PP9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.69■□□□□ 0.42
Trim16Q99PP9 Gm6420-201ENSMUST00000193885 723 ntBASIC17.69■□□□□ 0.42
Trim16Q99PP9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.69■□□□□ 0.42
Trim16Q99PP9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim16Q99PP9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim16Q99PP9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Nespas-201ENSMUST00000143738 1083 ntBASIC17.67■□□□□ 0.42
Trim16Q99PP9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim16Q99PP9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim16Q99PP9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim16Q99PP9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.66■□□□□ 0.42
Trim16Q99PP9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim16Q99PP9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim16Q99PP9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim16Q99PP9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim16Q99PP9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms