Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col25a1Q99MQ5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col25a1Q99MQ5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col25a1Q99MQ5 Flg-201ENSMUST00000050758 1488 ntBASIC18.77■□□□□ 0.59
Col25a1Q99MQ5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col25a1Q99MQ5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Gm28659-201ENSMUST00000188013 759 ntBASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col25a1Q99MQ5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.75■□□□□ 0.59
Col25a1Q99MQ5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col25a1Q99MQ5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col25a1Q99MQ5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Col25a1Q99MQ5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.75■□□□□ 0.59
Col25a1Q99MQ5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Col25a1Q99MQ5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col25a1Q99MQ5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col25a1Q99MQ5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col25a1Q99MQ5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 Gm27525-201ENSMUST00000184465 107 ntBASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col25a1Q99MQ5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col25a1Q99MQ5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms