Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdca3Q99M54 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdca3Q99M54 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdca3Q99M54 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdca3Q99M54 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdca3Q99M54 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdca3Q99M54 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdca3Q99M54 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Gm13836-201ENSMUST00000121159 501 ntBASIC16.79■□□□□ 0.28
Cdca3Q99M54 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.79■□□□□ 0.28
Cdca3Q99M54 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdca3Q99M54 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.78■□□□□ 0.28
Cdca3Q99M54 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cdca3Q99M54 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.78■□□□□ 0.28
Cdca3Q99M54 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.77■□□□□ 0.28
Cdca3Q99M54 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdca3Q99M54 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdca3Q99M54 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.77■□□□□ 0.28
Cdca3Q99M54 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdca3Q99M54 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdca3Q99M54 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdca3Q99M54 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdca3Q99M54 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdca3Q99M54 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdca3Q99M54 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdca3Q99M54 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cdca3Q99M54 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdca3Q99M54 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Cdca3Q99M54 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdca3Q99M54 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdca3Q99M54 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdca3Q99M54 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdca3Q99M54 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdca3Q99M54 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdca3Q99M54 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdca3Q99M54 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdca3Q99M54 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdca3Q99M54 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdca3Q99M54 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdca3Q99M54 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdca3Q99M54 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdca3Q99M54 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdca3Q99M54 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.76■□□□□ 0.27
Cdca3Q99M54 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdca3Q99M54 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdca3Q99M54 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdca3Q99M54 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdca3Q99M54 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.76■□□□□ 0.27
Cdca3Q99M54 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdca3Q99M54 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.76■□□□□ 0.27
Cdca3Q99M54 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdca3Q99M54 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdca3Q99M54 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdca3Q99M54 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdca3Q99M54 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdca3Q99M54 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Cdca3Q99M54 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdca3Q99M54 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdca3Q99M54 Gm13534-201ENSMUST00000121169 513 ntBASIC16.75■□□□□ 0.27
Cdca3Q99M54 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdca3Q99M54 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms