Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prdm9Q96EQ9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Prdm9Q96EQ9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prdm9Q96EQ9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prdm9Q96EQ9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prdm9Q96EQ9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prdm9Q96EQ9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prdm9Q96EQ9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prdm9Q96EQ9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prdm9Q96EQ9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prdm9Q96EQ9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Prdm9Q96EQ9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Prdm9Q96EQ9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Gm15375-201ENSMUST00000119510 849 ntBASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prdm9Q96EQ9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Golph3-205ENSMUST00000228671 2842 ntBASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Prdm9Q96EQ9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prdm9Q96EQ9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Prdm9Q96EQ9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prdm9Q96EQ9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prdm9Q96EQ9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prdm9Q96EQ9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prdm9Q96EQ9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prdm9Q96EQ9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Prdm9Q96EQ9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prdm9Q96EQ9 Mir6349-201ENSMUST00000184059 97 ntBASIC17.77■□□□□ 0.44
Prdm9Q96EQ9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Prdm9Q96EQ9 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.77■□□□□ 0.44
Prdm9Q96EQ9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms