Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha3Q91Y16 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.95■□□□□ 0.62
Pcdha3Q91Y16 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdha3Q91Y16 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha3Q91Y16 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pcdha3Q91Y16 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha3Q91Y16 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha3Q91Y16 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha3Q91Y16 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha3Q91Y16 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha3Q91Y16 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdha3Q91Y16 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha3Q91Y16 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha3Q91Y16 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.92■□□□□ 0.62
Pcdha3Q91Y16 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha3Q91Y16 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pcdha3Q91Y16 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha3Q91Y16 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha3Q91Y16 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha3Q91Y16 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha3Q91Y16 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.92■□□□□ 0.62
Pcdha3Q91Y16 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdha3Q91Y16 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha3Q91Y16 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha3Q91Y16 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha3Q91Y16 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdha3Q91Y16 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha3Q91Y16 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.9■□□□□ 0.62
Pcdha3Q91Y16 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha3Q91Y16 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha3Q91Y16 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha3Q91Y16 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha3Q91Y16 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha3Q91Y16 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Pcdha3Q91Y16 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdha3Q91Y16 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms