Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdha9Q91Y11 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdha9Q91Y11 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha9Q91Y11 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha9Q91Y11 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha9Q91Y11 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha9Q91Y11 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdha9Q91Y11 Gm20049-201ENSMUST00000219950 730 ntBASIC19.28■□□□□ 0.68
Pcdha9Q91Y11 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha9Q91Y11 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha9Q91Y11 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha9Q91Y11 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdha9Q91Y11 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdha9Q91Y11 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha9Q91Y11 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha9Q91Y11 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha9Q91Y11 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdha9Q91Y11 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha9Q91Y11 Gm12896-201ENSMUST00000118430 226 ntBASIC19.27■□□□□ 0.68
Pcdha9Q91Y11 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pcdha9Q91Y11 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.27■□□□□ 0.68
Pcdha9Q91Y11 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha9Q91Y11 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdha9Q91Y11 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdha9Q91Y11 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdha9Q91Y11 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdha9Q91Y11 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdha9Q91Y11 Gm11927-201ENSMUST00000118472 759 ntBASIC19.26■□□□□ 0.67
Pcdha9Q91Y11 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha9Q91Y11 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdha9Q91Y11 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdha9Q91Y11 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha9Q91Y11 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha9Q91Y11 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdha9Q91Y11 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha9Q91Y11 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha9Q91Y11 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha9Q91Y11 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Pcdha9Q91Y11 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha9Q91Y11 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha9Q91Y11 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha9Q91Y11 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdha9Q91Y11 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha9Q91Y11 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdha9Q91Y11 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdha9Q91Y11 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdha9Q91Y11 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdha9Q91Y11 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha9Q91Y11 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha9Q91Y11 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdha9Q91Y11 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha9Q91Y11 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha9Q91Y11 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdha9Q91Y11 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.23■□□□□ 0.67
Pcdha9Q91Y11 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Gm12527-201ENSMUST00000117967 564 ntBASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdha9Q91Y11 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms