Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb20Q91XZ9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhb20Q91XZ9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb20Q91XZ9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb20Q91XZ9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb20Q91XZ9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb20Q91XZ9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb20Q91XZ9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb20Q91XZ9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Gm45878-201ENSMUST00000211839 241 ntBASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb20Q91XZ9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Gm5643-201ENSMUST00000117081 966 ntBASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Gm13158-201ENSMUST00000122007 736 ntBASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb20Q91XZ9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Gm17872-201ENSMUST00000222550 532 ntBASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 AC154849.3-201ENSMUST00000223733 1660 ntBASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb20Q91XZ9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb20Q91XZ9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Gm38285-201ENSMUST00000192928 922 ntBASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb20Q91XZ9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms