Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga3Q91XY5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhga3Q91XY5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhga3Q91XY5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhga3Q91XY5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhga3Q91XY5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhga3Q91XY5 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga3Q91XY5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga3Q91XY5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhga3Q91XY5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga3Q91XY5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga3Q91XY5 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.14■□□□□ 0.17
Pcdhga3Q91XY5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga3Q91XY5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhga3Q91XY5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga3Q91XY5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga3Q91XY5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhga3Q91XY5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhga3Q91XY5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhga3Q91XY5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga3Q91XY5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga3Q91XY5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga3Q91XY5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga3Q91XY5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga3Q91XY5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga3Q91XY5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga3Q91XY5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga3Q91XY5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga3Q91XY5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Gm10849-201ENSMUST00000100397 618 ntBASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Gm6420-201ENSMUST00000193885 723 ntBASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga3Q91XY5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga3Q91XY5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga3Q91XY5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga3Q91XY5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhga3Q91XY5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms