Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Rab3c-203ENSMUST00000224180 967 ntBASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhga4Q91XY4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Gm26524-201ENSMUST00000192339 390 ntBASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhga4Q91XY4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhga4Q91XY4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhga4Q91XY4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhga4Q91XY4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga4Q91XY4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhga4Q91XY4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdhga4Q91XY4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms