Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Gm38205-201ENSMUST00000192243 258 ntBASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhgb2Q91XX7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgb2Q91XX7 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.03■□□□□ 0.32
Pcdhgb2Q91XX7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb2Q91XX7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb2Q91XX7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb2Q91XX7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb2Q91XX7 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.03■□□□□ 0.32
Pcdhgb2Q91XX7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhgb2Q91XX7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhgb2Q91XX7 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.03■□□□□ 0.32
Pcdhgb2Q91XX7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb2Q91XX7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb2Q91XX7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgb2Q91XX7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 Gm21956-201ENSMUST00000179946 522 ntBASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgb2Q91XX7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb2Q91XX7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb2Q91XX7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb2Q91XX7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb2Q91XX7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb2Q91XX7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb2Q91XX7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgb2Q91XX7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Gm26833-201ENSMUST00000180899 440 ntBASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Gm8969-201ENSMUST00000199694 526 ntBASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgb2Q91XX7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17■□□□□ 0.31
Pcdhgb2Q91XX7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb2Q91XX7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb2Q91XX7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb2Q91XX7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb2Q91XX7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb2Q91XX7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17■□□□□ 0.31
Pcdhgb2Q91XX7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb2Q91XX7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb2Q91XX7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb2Q91XX7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pcdhgb2Q91XX7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms