Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Odf4Q8VI88 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Odf4Q8VI88 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Odf4Q8VI88 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.16■□□□□ 0.18
Odf4Q8VI88 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.16■□□□□ 0.18
Odf4Q8VI88 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.16■□□□□ 0.18
Odf4Q8VI88 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Odf4Q8VI88 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Odf4Q8VI88 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Odf4Q8VI88 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Odf4Q8VI88 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Odf4Q8VI88 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Odf4Q8VI88 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.15■□□□□ 0.18
Odf4Q8VI88 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Odf4Q8VI88 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Odf4Q8VI88 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Odf4Q8VI88 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Odf4Q8VI88 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.15■□□□□ 0.18
Odf4Q8VI88 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.15■□□□□ 0.18
Odf4Q8VI88 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Odf4Q8VI88 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Odf4Q8VI88 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.15■□□□□ 0.18
Odf4Q8VI88 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.15■□□□□ 0.18
Odf4Q8VI88 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Odf4Q8VI88 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Odf4Q8VI88 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Odf4Q8VI88 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Odf4Q8VI88 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Odf4Q8VI88 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Odf4Q8VI88 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.13■□□□□ 0.17
Odf4Q8VI88 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Gm6420-201ENSMUST00000193885 723 ntBASIC16.13■□□□□ 0.17
Odf4Q8VI88 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.13■□□□□ 0.17
Odf4Q8VI88 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Gm6365-201ENSMUST00000054711 744 ntBASIC16.13■□□□□ 0.17
Odf4Q8VI88 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Odf4Q8VI88 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.13■□□□□ 0.17
Odf4Q8VI88 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Odf4Q8VI88 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.13■□□□□ 0.17
Odf4Q8VI88 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Odf4Q8VI88 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Odf4Q8VI88 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.12■□□□□ 0.17
Odf4Q8VI88 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Odf4Q8VI88 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Odf4Q8VI88 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Odf4Q8VI88 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Odf4Q8VI88 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Odf4Q8VI88 Gm13146-201ENSMUST00000118508 780 ntBASIC16.12■□□□□ 0.17
Odf4Q8VI88 Nespas-201ENSMUST00000143738 1083 ntBASIC16.12■□□□□ 0.17
Odf4Q8VI88 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.12■□□□□ 0.17
Odf4Q8VI88 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.12■□□□□ 0.17
Odf4Q8VI88 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.12■□□□□ 0.17
Odf4Q8VI88 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms