Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Pcdh18Q8VHR0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh18Q8VHR0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh18Q8VHR0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh18Q8VHR0 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.45■□□□□ 0.38
Pcdh18Q8VHR0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh18Q8VHR0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdh18Q8VHR0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh18Q8VHR0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh18Q8VHR0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh18Q8VHR0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcdh18Q8VHR0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh18Q8VHR0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh18Q8VHR0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh18Q8VHR0 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.44■□□□□ 0.38
Pcdh18Q8VHR0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh18Q8VHR0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Gm45417-201ENSMUST00000209533 758 ntBASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Gm6139-201ENSMUST00000079261 882 ntBASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdh18Q8VHR0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Gm27801-201ENSMUST00000184174 223 ntBASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdh18Q8VHR0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdh18Q8VHR0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdh18Q8VHR0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms