Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rab40cQ8VHQ4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rab40cQ8VHQ4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rab40cQ8VHQ4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rab40cQ8VHQ4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rab40cQ8VHQ4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rab40cQ8VHQ4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.79□□□□□ -0.04
Rab40cQ8VHQ4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rab40cQ8VHQ4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rab40cQ8VHQ4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rab40cQ8VHQ4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rab40cQ8VHQ4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Rab40cQ8VHQ4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rab40cQ8VHQ4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rab40cQ8VHQ4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rab40cQ8VHQ4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.77□□□□□ -0.04
Rab40cQ8VHQ4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rab40cQ8VHQ4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rab40cQ8VHQ4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.77□□□□□ -0.04
Rab40cQ8VHQ4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rab40cQ8VHQ4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rab40cQ8VHQ4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rab40cQ8VHQ4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.77□□□□□ -0.05
Rab40cQ8VHQ4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.77□□□□□ -0.05
Rab40cQ8VHQ4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.77□□□□□ -0.05
Rab40cQ8VHQ4 Gm13241-201ENSMUST00000094493 780 ntBASIC14.77□□□□□ -0.05
Rab40cQ8VHQ4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rab40cQ8VHQ4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rab40cQ8VHQ4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rab40cQ8VHQ4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rab40cQ8VHQ4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rab40cQ8VHQ4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms