Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpusd1Q8VCZ8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpusd1Q8VCZ8 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.34■□□□□ 0.37
Rpusd1Q8VCZ8 Odf3b-204ENSMUST00000227834 930 ntBASIC17.34■□□□□ 0.37
Rpusd1Q8VCZ8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpusd1Q8VCZ8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpusd1Q8VCZ8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpusd1Q8VCZ8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpusd1Q8VCZ8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Rpusd1Q8VCZ8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rpusd1Q8VCZ8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpusd1Q8VCZ8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpusd1Q8VCZ8 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.33■□□□□ 0.37
Rpusd1Q8VCZ8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Rpusd1Q8VCZ8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpusd1Q8VCZ8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rpusd1Q8VCZ8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpusd1Q8VCZ8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rpusd1Q8VCZ8 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Gm30025-201ENSMUST00000218555 728 ntBASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Timm23-208ENSMUST00000226683 750 ntBASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpusd1Q8VCZ8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpusd1Q8VCZ8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Mir2861-201ENSMUST00000175539 82 ntBASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rpusd1Q8VCZ8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpusd1Q8VCZ8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpusd1Q8VCZ8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpusd1Q8VCZ8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpusd1Q8VCZ8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpusd1Q8VCZ8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpusd1Q8VCZ8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms