Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Vps39Q8R5L3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps39Q8R5L3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps39Q8R5L3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps39Q8R5L3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps39Q8R5L3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps39Q8R5L3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.17■□□□□ 0.5
Vps39Q8R5L3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps39Q8R5L3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps39Q8R5L3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.17■□□□□ 0.5
Vps39Q8R5L3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps39Q8R5L3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps39Q8R5L3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps39Q8R5L3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps39Q8R5L3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Gm18671-201ENSMUST00000214826 683 ntBASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps39Q8R5L3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Gm6420-201ENSMUST00000193885 723 ntBASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps39Q8R5L3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps39Q8R5L3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps39Q8R5L3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.14■□□□□ 0.5
Vps39Q8R5L3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Gm7514-201ENSMUST00000209475 934 ntBASIC18.14■□□□□ 0.49
Vps39Q8R5L3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Vps39Q8R5L3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vps39Q8R5L3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Nespas-201ENSMUST00000143738 1083 ntBASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vps39Q8R5L3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Gm22325-201ENSMUST00000158904 308 ntBASIC18.11■□□□□ 0.49
Vps39Q8R5L3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.11■□□□□ 0.49
Vps39Q8R5L3 Gm42642-201ENSMUST00000200683 355 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms