Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Zcchc9Q8R1J3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Mir1199-201ENSMUST00000117015 119 ntBASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.04■□□□□ 0.48
Zcchc9Q8R1J3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Zcchc9Q8R1J3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Zcchc9Q8R1J3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Zcchc9Q8R1J3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.02■□□□□ 0.48
Zcchc9Q8R1J3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.02■□□□□ 0.48
Zcchc9Q8R1J3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.02■□□□□ 0.48
Zcchc9Q8R1J3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Zcchc9Q8R1J3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Zcchc9Q8R1J3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Zcchc9Q8R1J3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Zcchc9Q8R1J3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Zcchc9Q8R1J3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Zcchc9Q8R1J3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Zcchc9Q8R1J3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Zcchc9Q8R1J3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Zcchc9Q8R1J3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zcchc9Q8R1J3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zcchc9Q8R1J3 Gm45606-201ENSMUST00000209836 2795 ntBASIC18■□□□□ 0.47
Zcchc9Q8R1J3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18■□□□□ 0.47
Zcchc9Q8R1J3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18■□□□□ 0.47
Zcchc9Q8R1J3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zcchc9Q8R1J3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Zcchc9Q8R1J3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Zcchc9Q8R1J3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zcchc9Q8R1J3 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.99■□□□□ 0.47
Zcchc9Q8R1J3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.99■□□□□ 0.47
Zcchc9Q8R1J3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zcchc9Q8R1J3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zcchc9Q8R1J3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Zcchc9Q8R1J3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Zcchc9Q8R1J3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms