Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cystm1Q8K353 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC11.36□□□□□ -0.59
Cystm1Q8K353 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cystm1Q8K353 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Gm8493-201ENSMUST00000196881 489 ntBASIC11.36□□□□□ -0.59
Cystm1Q8K353 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Gm43808-201ENSMUST00000202534 2065 ntBASIC11.36□□□□□ -0.59
Cystm1Q8K353 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cystm1Q8K353 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Gm7160-202ENSMUST00000188519 1027 ntBASIC11.35□□□□□ -0.59
Cystm1Q8K353 Gm8495-201ENSMUST00000188740 694 ntBASIC11.35□□□□□ -0.59
Cystm1Q8K353 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.35□□□□□ -0.59
Cystm1Q8K353 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cystm1Q8K353 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cystm1Q8K353 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Cystm1Q8K353 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 Gm18284-201ENSMUST00000172604 624 ntBASIC11.33□□□□□ -0.6
Cystm1Q8K353 Flvcr1-202ENSMUST00000191946 1216 ntBASIC11.33□□□□□ -0.6
Cystm1Q8K353 Gm2011-201ENSMUST00000203124 1263 ntBASIC11.33□□□□□ -0.6
Cystm1Q8K353 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC11.33□□□□□ -0.6
Cystm1Q8K353 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cystm1Q8K353 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Cystm1Q8K353 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms