Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4rl1Q8K0S5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Rtn4rl1Q8K0S5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4rl1Q8K0S5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4rl1Q8K0S5 Gm23634-201ENSMUST00000175071 91 ntBASIC18.4■□□□□ 0.54
Rtn4rl1Q8K0S5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4rl1Q8K0S5 Gm18032-201ENSMUST00000222541 538 ntBASIC18.4■□□□□ 0.54
Rtn4rl1Q8K0S5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4rl1Q8K0S5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4rl1Q8K0S5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4rl1Q8K0S5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn4rl1Q8K0S5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtn4rl1Q8K0S5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn4rl1Q8K0S5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4rl1Q8K0S5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4rl1Q8K0S5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4rl1Q8K0S5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4rl1Q8K0S5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm45058-201ENSMUST00000205810 766 ntBASIC18.38■□□□□ 0.53
Rtn4rl1Q8K0S5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4rl1Q8K0S5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rtn4rl1Q8K0S5 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.38■□□□□ 0.53
Rtn4rl1Q8K0S5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm27463-201ENSMUST00000183569 57 ntBASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm38027-201ENSMUST00000192315 235 ntBASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Rtn4rl1Q8K0S5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.36■□□□□ 0.53
Rtn4rl1Q8K0S5 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rtn4rl1Q8K0S5 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rtn4rl1Q8K0S5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rtn4rl1Q8K0S5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4rl1Q8K0S5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4rl1Q8K0S5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rtn4rl1Q8K0S5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rtn4rl1Q8K0S5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm10013-201ENSMUST00000106074 672 ntBASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Gm6345-202ENSMUST00000180900 204 ntBASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn4rl1Q8K0S5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtn4rl1Q8K0S5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms