Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Tgds-204ENSMUST00000228543 1594 ntBASIC19.15■□□□□ 0.66
Ccdc28aQ8CEI3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc28aQ8CEI3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc28aQ8CEI3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28aQ8CEI3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc28aQ8CEI3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28aQ8CEI3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28aQ8CEI3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28aQ8CEI3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28aQ8CEI3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28aQ8CEI3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc28aQ8CEI3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc28aQ8CEI3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc28aQ8CEI3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28aQ8CEI3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28aQ8CEI3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28aQ8CEI3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28aQ8CEI3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.12■□□□□ 0.65
Ccdc28aQ8CEI3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28aQ8CEI3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28aQ8CEI3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc28aQ8CEI3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28aQ8CEI3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28aQ8CEI3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28aQ8CEI3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc28aQ8CEI3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ccdc28aQ8CEI3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc28aQ8CEI3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc28aQ8CEI3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc28aQ8CEI3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.1■□□□□ 0.65
Ccdc28aQ8CEI3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc28aQ8CEI3 Gm43017-201ENSMUST00000198296 752 ntBASIC19.1■□□□□ 0.65
Ccdc28aQ8CEI3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc28aQ8CEI3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc28aQ8CEI3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc28aQ8CEI3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc28aQ8CEI3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc28aQ8CEI3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28aQ8CEI3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28aQ8CEI3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc28aQ8CEI3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28aQ8CEI3 Gm8969-201ENSMUST00000199694 526 ntBASIC19.09■□□□□ 0.65
Ccdc28aQ8CEI3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28aQ8CEI3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28aQ8CEI3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc28aQ8CEI3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28aQ8CEI3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc28aQ8CEI3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms