Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb7Q8CDY9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb7Q8CDY9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.19■□□□□ 0.5
Pcdhb7Q8CDY9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb7Q8CDY9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb7Q8CDY9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Pcdhb7Q8CDY9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb7Q8CDY9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb7Q8CDY9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.17■□□□□ 0.5
Pcdhb7Q8CDY9 Gm42569-201ENSMUST00000200539 472 ntBASIC18.17■□□□□ 0.5
Pcdhb7Q8CDY9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhb7Q8CDY9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb7Q8CDY9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb7Q8CDY9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb7Q8CDY9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdhb7Q8CDY9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb7Q8CDY9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb7Q8CDY9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms