Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcpip1Q8CDG3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcpip1Q8CDG3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcpip1Q8CDG3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcpip1Q8CDG3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcpip1Q8CDG3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vcpip1Q8CDG3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vcpip1Q8CDG3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vcpip1Q8CDG3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Gm10033-202ENSMUST00000211874 928 ntBASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vcpip1Q8CDG3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vcpip1Q8CDG3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vcpip1Q8CDG3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Vcpip1Q8CDG3 AV356131-201ENSMUST00000206201 750 ntBASIC19.42■□□□□ 0.7
Vcpip1Q8CDG3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Vcpip1Q8CDG3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Vcpip1Q8CDG3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vcpip1Q8CDG3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.42■□□□□ 0.7
Vcpip1Q8CDG3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vcpip1Q8CDG3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.41■□□□□ 0.7
Vcpip1Q8CDG3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vcpip1Q8CDG3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.41■□□□□ 0.7
Vcpip1Q8CDG3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vcpip1Q8CDG3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vcpip1Q8CDG3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.41■□□□□ 0.7
Vcpip1Q8CDG3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vcpip1Q8CDG3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vcpip1Q8CDG3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Vcpip1Q8CDG3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vcpip1Q8CDG3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 Tgds-204ENSMUST00000228543 1594 ntBASIC19.4■□□□□ 0.7
Vcpip1Q8CDG3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Vcpip1Q8CDG3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vcpip1Q8CDG3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Vcpip1Q8CDG3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Vcpip1Q8CDG3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vcpip1Q8CDG3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vcpip1Q8CDG3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vcpip1Q8CDG3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
Vcpip1Q8CDG3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.39■□□□□ 0.69
Vcpip1Q8CDG3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.39■□□□□ 0.69
Vcpip1Q8CDG3 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.39■□□□□ 0.69
Vcpip1Q8CDG3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms