Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pabpn1Q8CCS6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pabpn1Q8CCS6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pabpn1Q8CCS6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pabpn1Q8CCS6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pabpn1Q8CCS6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC28.34■■■□□ 2.13
Pabpn1Q8CCS6 AC124569.2-201ENSMUST00000225998 818 ntBASIC28.34■■■□□ 2.13
Pabpn1Q8CCS6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Pabpn1Q8CCS6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Pabpn1Q8CCS6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC28.34■■■□□ 2.13
Pabpn1Q8CCS6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pabpn1Q8CCS6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Pabpn1Q8CCS6 Gm27702-201ENSMUST00000184512 56 ntBASIC28.33■■■□□ 2.13
Pabpn1Q8CCS6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Pabpn1Q8CCS6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pabpn1Q8CCS6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC28.33■■■□□ 2.13
Pabpn1Q8CCS6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pabpn1Q8CCS6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC28.32■■■□□ 2.12
Pabpn1Q8CCS6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Pabpn1Q8CCS6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pabpn1Q8CCS6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pabpn1Q8CCS6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
Pabpn1Q8CCS6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC28.32■■■□□ 2.12
Pabpn1Q8CCS6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC28.32■■■□□ 2.12
Pabpn1Q8CCS6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Pabpn1Q8CCS6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC28.32■■■□□ 2.12
Pabpn1Q8CCS6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Pabpn1Q8CCS6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC28.31■■■□□ 2.12
Pabpn1Q8CCS6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Pabpn1Q8CCS6 Gm43575-201ENSMUST00000196420 516 ntBASIC28.31■■■□□ 2.12
Pabpn1Q8CCS6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Pabpn1Q8CCS6 Gm8784-201ENSMUST00000222096 1435 ntBASIC28.31■■■□□ 2.12
Pabpn1Q8CCS6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Pabpn1Q8CCS6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Pabpn1Q8CCS6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Pabpn1Q8CCS6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pabpn1Q8CCS6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pabpn1Q8CCS6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pabpn1Q8CCS6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC28.3■■■□□ 2.12
Pabpn1Q8CCS6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Pabpn1Q8CCS6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC28.3■■■□□ 2.12
Pabpn1Q8CCS6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC28.3■■■□□ 2.12
Pabpn1Q8CCS6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC28.3■■■□□ 2.12
Pabpn1Q8CCS6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pabpn1Q8CCS6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC28.3■■■□□ 2.12
Pabpn1Q8CCS6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Pabpn1Q8CCS6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Pabpn1Q8CCS6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pabpn1Q8CCS6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC28.29■■■□□ 2.12
Pabpn1Q8CCS6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC28.29■■■□□ 2.12
Pabpn1Q8CCS6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
Pabpn1Q8CCS6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pabpn1Q8CCS6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pabpn1Q8CCS6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pabpn1Q8CCS6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC28.28■■■□□ 2.12
Pabpn1Q8CCS6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Pabpn1Q8CCS6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC28.28■■■□□ 2.12
Pabpn1Q8CCS6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Pabpn1Q8CCS6 Gm10576-201ENSMUST00000191927 825 ntBASIC28.28■■■□□ 2.12
Pabpn1Q8CCS6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC28.28■■■□□ 2.12
Pabpn1Q8CCS6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC28.28■■■□□ 2.12
Pabpn1Q8CCS6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Pabpn1Q8CCS6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
Pabpn1Q8CCS6 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pabpn1Q8CCS6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
Pabpn1Q8CCS6 Gm6736-201ENSMUST00000166583 948 ntBASIC28.27■■■□□ 2.12
Pabpn1Q8CCS6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC28.27■■■□□ 2.12
Pabpn1Q8CCS6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Pabpn1Q8CCS6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pabpn1Q8CCS6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pabpn1Q8CCS6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pabpn1Q8CCS6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Pabpn1Q8CCS6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pabpn1Q8CCS6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Pabpn1Q8CCS6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
Pabpn1Q8CCS6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
Pabpn1Q8CCS6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Pabpn1Q8CCS6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Pabpn1Q8CCS6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pabpn1Q8CCS6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pabpn1Q8CCS6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pabpn1Q8CCS6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pabpn1Q8CCS6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Pabpn1Q8CCS6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pabpn1Q8CCS6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pabpn1Q8CCS6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC28.25■■■□□ 2.11
Pabpn1Q8CCS6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC28.25■■■□□ 2.11
Pabpn1Q8CCS6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pabpn1Q8CCS6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pabpn1Q8CCS6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pabpn1Q8CCS6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pabpn1Q8CCS6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pabpn1Q8CCS6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Pabpn1Q8CCS6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Pabpn1Q8CCS6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pabpn1Q8CCS6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC28.24■■■□□ 2.11
Pabpn1Q8CCS6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pabpn1Q8CCS6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC28.24■■■□□ 2.11
Pabpn1Q8CCS6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC28.24■■■□□ 2.11
Pabpn1Q8CCS6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms