Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Lysmd4Q8CC84 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Mir7075-201ENSMUST00000184187 82 ntBASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lysmd4Q8CC84 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Gm21956-201ENSMUST00000179946 522 ntBASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lysmd4Q8CC84 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Lysmd4Q8CC84 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.27■□□□□ 0.19
Lysmd4Q8CC84 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
Lysmd4Q8CC84 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lysmd4Q8CC84 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.27■□□□□ 0.19
Lysmd4Q8CC84 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lysmd4Q8CC84 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lysmd4Q8CC84 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Gm8493-201ENSMUST00000196881 489 ntBASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Lysmd4Q8CC84 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms